LEMON-ZEST: Evolution-Informed Tokenization for Efficient Protein Language Modeling
cs.LG, q-bio.BM
Submitted: 2026-09-29
Updated: 2026-09-29
Terminology
Sources
- Training Compute-Optimal Large Language Models
- Scaling Laws for Neural Language Models
- Protein Structure Tokenization via Geometric Byte Pair Encoding
- PUMA: Learning a Mutation-Aware Vocabulary of Protein Units
- GLU Variants Improve Transformer
- Train Short, Test Long: Attention with Linear Biases Enables Input Length Extrapolation
- Ankh: Optimized Protein Language Model Unlocks General-Purpose Modelling
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