Assay-Aware BindingDB: Curating Experimental Context for Binding Affinity Prediction

arXiv:2609.34001 · q-bio.BM · Submitted 2026-09-27 · Read on arXiv

q-bio.BM

Submitted: 2026-09-27

Updated: 2026-09-27

Terminology

• Ontology — 24× in this paper · explained in 2 episodes
• Accuracy — 17× in this paper · explained in 1 episode
• Anisotropy — 11× in this paper · explained in 3 episodes
• Fidelity — 7× in this paper · explained in 2 episodes
• Surface Plasmon Resonance — 7× in this paper
• Aggregation — 5× in this paper · explained in 1 episode
• Isothermal Titration Calorimetry — 5× in this paper
• Agentic Framework — 3× in this paper · explained in 6 episodes
• Provenance — 3× in this paper · explained in 4 episodes
• AI Agents — 2× in this paper · explained in 2 episodes
• Agentic System — 2× in this paper · explained in 2 episodes
• Core — 2× in this paper · explained in 2 episodes
• Fluorescence Anisotropy — 2× in this paper
• Generalization — 2× in this paper · explained in 13 episodes
• Hallucination — 2× in this paper · explained in 4 episodes
• Radioligand Binding Assay — 2× in this paper
• Semantic Gap — 2× in this paper · explained in 2 episodes
• Ablation — 1× in this paper · explained in 1 episode
• Agent Architectures — 1× in this paper · explained in 1 episode
• Agentic AI — 1× in this paper · explained in 1 episode
• EMMA — 1× in this paper · explained in 2 episodes
• Embeddings — 1× in this paper · explained in 2 episodes
• Foundation Model — 1× in this paper · explained in 3 episodes
• Foundation Models — 1× in this paper · explained in 7 episodes
• Multi-Agent System — 1× in this paper · explained in 6 episodes
• Response Units — 1× in this paper
• Scintillation Proximity Assay — 1× in this paper
• Thinking mode — 1× in this paper · explained in 2 episodes
• Unified Framework — 1× in this paper · explained in 5 episodes

Sources

• A Multi-Agent System Enables Versatile Information Extraction from the Chemical Literature
• A Comprehensive Survey of Self-Evolving AI Agents: A New Paradigm Bridging Foundation Models and Lifelong Agentic Systems
• From LLM Reasoning to Autonomous AI Agents: A Comprehensive Review
• The Landscape of Emerging AI Agent Architectures for Reasoning, Planning, and Tool Calling: A Survey
• Qwen3 Technical Report

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