Robust Biomolecular Complex Design Across Protein Conformational Landscapes

arXiv:2609.33726 · cs.AI, q-bio.QM · Submitted 2026-09-27 · Read on arXiv

cs.AI, q-bio.QM

Submitted: 2026-09-27

Updated: 2026-10-02

Terminology

• Adaptation — 81× in this paper · explained in 1 episode
• Robustness — 22× in this paper · explained in 5 episodes
• Aggregation — 11× in this paper · explained in 1 episode
• AUC — 10× in this paper · explained in 2 episodes
• Benchmark — 10× in this paper · explained in 2 episodes
• Alignment — 9× in this paper · explained in 1 episode
• Core — 9× in this paper · explained in 2 episodes
• Pruning — 9× in this paper · explained in 4 episodes
• Accuracy — 7× in this paper · explained in 1 episode
• Ablation — 5× in this paper · explained in 1 episode
• Consistency — 5× in this paper · explained in 3 episodes
• Diffusion Model — 5× in this paper · explained in 8 episodes
• Provenance — 5× in this paper · explained in 4 episodes
• Diffusion Models — 4× in this paper · explained in 6 episodes
• Model-Agnostic — 3× in this paper · explained in 2 episodes
• Sparsity — 3× in this paper · explained in 4 episodes
• Decode — 2× in this paper · explained in 2 episodes
• Generative Model — 2× in this paper · explained in 2 episodes
• Pairwise Comparisons — 2× in this paper · explained in 2 episodes
• Redundancy — 2× in this paper · explained in 2 episodes
• Attention Mechanism — 1× in this paper · explained in 3 episodes
• Bayesian Optimization — 1× in this paper · explained in 3 episodes
• Bayesian Optimization (BO) — 1× in this paper · explained in 3 episodes
• Computational Biology — 1× in this paper · explained in 2 episodes
• Generative AI — 1× in this paper · explained in 2 episodes
• Generative Modeling — 1× in this paper · explained in 3 episodes
• Grounding — 1× in this paper · explained in 3 episodes
• Hamming Distance — 1× in this paper · explained in 2 episodes
• Self-Supervised Learning — 1× in this paper · explained in 8 episodes
• Trace — 1× in this paper · explained in 2 episodes
• Transferability — 1× in this paper · explained in 4 episodes

Sources

• Cross-Modality Attack Boosted by Gradient-Evolutionary Multiform Optimization
• Med-Scout: Curing MLLMs' Geometric Blindness in Medical Perception via Geometry-Aware RL Post-Training
• Don't Retrain, Just Reuse: Recovering Dual-Target Molecules from Single-Target Diffusion Models
• Can Broad Biomedical Knowledge be Contextualized into Scenario-Grounded Propositions?

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