Bison: Cross-Dataset Learning for Unseen-Compound Perturbation Prediction

arXiv:2609.32467 · cs.LG, cs.AI · Submitted 2026-09-26 · Read on arXiv

cs.LG, cs.AI

Submitted: 2026-09-26

Updated: 2026-09-26

Terminology

• Benchmark — 30× in this paper · explained in 2 episodes
• Calibration — 13× in this paper · explained in 7 episodes
• Decode — 5× in this paper · explained in 2 episodes
• AUC — 4× in this paper · explained in 2 episodes
• Ablation — 4× in this paper · explained in 1 episode
• Aggregation — 4× in this paper · explained in 1 episode
• Diffusion Model — 4× in this paper · explained in 8 episodes
• Diffusion Models — 4× in this paper · explained in 6 episodes
• Generalization — 4× in this paper · explained in 13 episodes
• Transformer — 4× in this paper · explained in 2 episodes
• Adaptation — 2× in this paper · explained in 1 episode
• Benchmarking — 2× in this paper · explained in 3 episodes
• Clustering — 2× in this paper · explained in 2 episodes
• Embeddings — 2× in this paper · explained in 2 episodes
• Generative AI — 2× in this paper · explained in 2 episodes
• Generative Model — 2× in this paper · explained in 2 episodes
• Quantization — 2× in this paper · explained in 12 episodes
• alpha — 2× in this paper · explained in 1 episode
• Adam — 1× in this paper · explained in 2 episodes
• Flow Matching — 1× in this paper · explained in 8 episodes
• Foundation Model — 1× in this paper · explained in 3 episodes
• Generative Models — 1× in this paper · explained in 2 episodes
• Heterogeneous Graph — 1× in this paper · explained in 2 episodes
• Knowledge Graph — 1× in this paper · explained in 7 episodes
• Knowledge graphs — 1× in this paper · explained in 2 episodes
• Latent Diffusion Model — 1× in this paper · explained in 2 episodes
• Latent Diffusion Models — 1× in this paper · explained in 2 episodes
• Latent Space — 1× in this paper · explained in 7 episodes
• Perplexity — 1× in this paper · explained in 3 episodes
• Regularization — 1× in this paper · explained in 3 episodes

Sources

• Scalable Single-Cell Gene Expression Generation with Latent Diffusion Models
• Chem-PerturBridge: a harmonized compendium of small molecule perturbation transcriptomic effects

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