AxonSynth: Domain-Randomized Synthetic Data for Zero-Shot 3D Axon Segmentation in Light-Sheet Microscopy

arXiv:2609.31431 · cs.CV · Submitted 2026-09-25 · Read on arXiv

cs.CV

Submitted: 2026-09-25

Updated: 2026-09-29

Code: https://github.com/lincbrain/axonsynth

Terminology

• Ablation — 3× in this paper · explained in 1 episode
• Aggregation — 2× in this paper · explained in 1 episode
• Fine-Tuning — 2× in this paper · explained in 5 episodes
• Adam — 1× in this paper · explained in 2 episodes
• Adaptation — 1× in this paper · explained in 1 episode
• Calibration — 1× in this paper · explained in 7 episodes
• Domain Adaptation — 1× in this paper · explained in 5 episodes
• Regularization — 1× in this paper · explained in 3 episodes
• Transfer Learning — 1× in this paper · explained in 10 episodes
• Zero-Shot Transfer — 1× in this paper · explained in 4 episodes

Sources

• MONAI: An open-source framework for deep learning in healthcare
• Neurovascular Segmentation in sOCT with Deep Learning and Synthetic Training Data
• Multi-Domain Data Aggregation for Axon and Myelin Segmentation in Histology Images

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