Driving Epidemic Models with AI Agents: the Epydemix Agent Framework

arXiv:2609.28692 · cs.AI, cs.CY · Submitted 2026-09-23 · Read on arXiv

cs.AI, cs.CY

Submitted: 2026-09-23

Updated: 2026-09-23

Code: https://github.com/epistorm/epydemix

Terminology

• Calibration — 31× in this paper · explained in 7 episodes
• AI Agents — 6× in this paper · explained in 2 episodes
• Provenance — 6× in this paper · explained in 3 episodes
• Agent Harness — 3× in this paper · explained in 2 episodes
• Benchmark — 3× in this paper · explained in 2 episodes
• Failure Modes — 3× in this paper · explained in 3 episodes
• Computational Biology — 2× in this paper · explained in 2 episodes
• Consistency — 2× in this paper · explained in 3 episodes
• Model Context Protocol — 2× in this paper
• Verification — 2× in this paper · explained in 2 episodes
• Agentic Coding — 1× in this paper · explained in 1 episode
• Artificial Intelligence (AI) — 1× in this paper · explained in 2 episodes
• Core — 1× in this paper · explained in 2 episodes
• Model Context Protocol (MCP) — 1× in this paper · explained in 8 episodes
• Stochastic Dynamics — 1× in this paper · explained in 2 episodes
• Task Planning — 1× in this paper · explained in 2 episodes

Sources

• ReAct: Synergizing Reasoning and Acting in Language Models

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