Foundation-model-based multi-label phenotyping of combined hyperkinetic movement disorders

arXiv:2609.22369 · q-bio.QM, q-bio.NC · Submitted 2026-09-17 · Read on arXiv

q-bio.QM, q-bio.NC

Submitted: 2026-09-17

Updated: 2026-09-17

Code: https://github.com/xaviervasques/cody-sam3

Terminology

• Calibration — 48× in this paper · explained in 7 episodes
• Foundation Model — 19× in this paper · explained in 3 episodes
• AUC — 12× in this paper · explained in 2 episodes
• Foundation Models — 10× in this paper · explained in 7 episodes
• Accuracy — 9× in this paper · explained in 1 episode
• Robustness — 7× in this paper · explained in 5 episodes
• Aggregation — 6× in this paper · explained in 1 episode
• Feature Extraction — 4× in this paper · explained in 2 episodes
• Adaptation — 3× in this paper · explained in 1 episode
• External Validation — 2× in this paper · explained in 2 episodes
• Interpretability — 2× in this paper · explained in 15 episodes
• Cooperation — 1× in this paper · explained in 2 episodes
• Decision-Support Tool — 1× in this paper · explained in 2 episodes
• Distribution Shift — 1× in this paper · explained in 5 episodes
• In-Context Learning — 1× in this paper · explained in 4 episodes
• Transferability — 1× in this paper · explained in 4 episodes
• Transformer — 1× in this paper · explained in 2 episodes

Sources

• Facial Tic Detection in Untrimmed Videos of Tourette Syndrome Patients
• Simultaneous hyperkinetic movement disorders phenotyping: a cross-cohort pediatric transfer study using routine videos, markerless pose estimation and a tabular foundation model
• SAM 3: Segment Anything with Concepts
• TabICL: A Tabular Foundation Model for In-Context Learning on Large Data
• TabICLv2: A better, faster, scalable, and open tabular foundation model
• SAM 3D Body: Robust Full-Body Human Mesh Recovery

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