MAST: Label-Efficient, Robust, and Generalizable Sound Detection for Biodiversity Monitoring via Masked Audio Pretraining and Self-Training

arXiv:2609.15221 · cs.SD, cs.LG · Submitted 2026-09-14 · Read on arXiv

cs.SD, cs.LG

Submitted: 2026-09-14

Updated: 2026-09-14

Comments: 29 pages, 8 figures

License: http://creativecommons.org/licenses/by/4.0/

The gist: Passive acoustic monitoring can measure biodiversity at larger scales, but time--frequency annotation of animal vocalizations is expensive, site-specific, and difficult to sustain at scale.

Terminology

Abstract

Passive acoustic monitoring can measure biodiversity at larger scales, but time--frequency annotation of animal vocalizations is expensive, site-specific, and difficult to sustain at scale. We present a label-efficient sound detection framework that combines masked audio pretraining with a lightweight detector on mel spectrograms, then further improves robustness through iterative self-training on unlabeled audio. We first pretrain a ViT-based encoder on unlabeled recordings via masked reconstruction and transfer the encoder to a detection backbone. To better separate animal sounds from confounding background, we add a box-level contrastive loss that pulls matched event regions together while pushing noisy negatives apart. We then apply a two-stage pseudo-labeling curriculum to exploit large unlabeled pools without additional annotation. We evaluate the performance on two ecologically distinct domains: tropical rainforest soundscapes (Indonesia) and bird vocalizations in Mediterranean habitats (Spain). On both domains, masked audio pretraining and contrastive learning consistently improve time--frequency detection under temporal and cross-site distribution shift, and self-training yields further gains in out-of-distribution performance. On the rainforest domain, MAST with self-training achieves +0.22 mAP and +0.24 F1 over the strongest baseline under cross-site shift. On the bird domain, self-training achieves +0.12 mAP and +0.10 F1 over the strongest baseline under cross-site shift. Overall, our results show that MAST can effectively extend self-supervised audio representations from clip-level tasks to robust box-level localization across diverse bioacoustic settings, providing a practical path for biodiversity monitoring with limited labels.

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