When Agents Disagree: The Selection Bottleneck in Multi-Agent LLM Pipelines

arXiv:2603.20324 · cs.MA, cs.AI · Submitted 2026-03-20 · Read on arXiv

cs.MA, cs.AI

Submitted: 2026-03-20

Updated: 2026-07-21

Comments: v2: Updated author list to match the published version. Published in Applied Sciences (MDPI) 2026, DOI: 10.3390/app1010000

Journal ref: Applied Sciences 16(10), 4914 (2026)

DOI: 10.3390/app16104914

Code: https://github.com/maryanskyy/agents-disagree-experiments

License: http://creativecommons.org/licenses/by/4.0/

The gist: Multi-agent LLM pipelines produce contradictory evidence on whether team diversity improves output quality: heterogeneous Mixture-of-Agents teams outperform single models, yet homogeneous Self-MoA

Terminology

Abstract

Multi-agent LLM pipelines produce contradictory evidence on whether team diversity improves output quality: heterogeneous Mixture-of-Agents teams outperform single models, yet homogeneous Self-MoA teams consistently win under synthesis-based aggregation. We propose a resolution by identifying the selection bottleneck -- a crossover threshold in aggregation quality that determines whether diversity helps or hurts. Under this model, we obtain a closed-form crossover threshold s* (Proposition 1) that separates the regimes where diversity helps and hurts. In a targeted experiment spanning 42 tasks across 7 categories (N=210), a diverse team with judge-based selection achieves a win rate of 0.810 against a single-model baseline, while a homogeneous team scores 0.512 -- near chance (Glass's Δ= 2.07). Judge-based selection outperforms MoA-style synthesis by Δ WR = +0.631 -- the synthesis approach is preferred over the baseline in zero of 42 tasks by the judge panel. A decoupled evaluation with independent judges confirms all directional findings (Spearman ρ= 0.90). Exploratory evidence suggests that including a weaker model improves performance while reducing cost (p < 10-4, not pre-registered). Our results suggest that selector quality may be a more impactful design lever than generator diversity in single-round generate-then-select pipelines.

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